Dataset for transcriptional response of barley (Hordeum vulgare) exposed to drought and subsequent re-watering

نویسندگان

  • Filip Kokáš
  • Petr Vojta
  • Petr Galuszka
چکیده

Barley (Hordeum vulgare) is an economically important species, which can be cultivated in environmentally adverse conditions due to its higher tolerance in contrast to other cereal crops. The draft of H. vulgare genome is available already for couple of years; however its functional annotation is still incomplete. All available databases were searched to expand current annotation. The improved annotation was used to describe processes and genes regulated in transgenic lines showing higher tolerance to drought in our associated article, doi:10.1016/j.nbt.2016.01.010 (Vojta et al., 2016) [1]. Here we present whole transcriptome response, using extended annotation, to severe drought stress and subsequent re-watering in wild-type barley plants in stem elongation phase of growth. Up- and down-regulated genes fall into distinct GO categories and these enriched by stress and revitalization are highlighted. Transcriptomic data were evaluated separately for root and aerial tissues.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Detection of LTR Retrotransposons Reactivation induced by in vitro Environmental Stresses in Barley (Hordeum vulgare) via RT-qPCR

The effects of four environmental stresses of heat, drought, wounding and cell culture, on the transcriptional reactivation of seven long terminal repeat retrotransposons (LTRs) of barley (Hordeum vulgare) genome, were investigated. These LTRs included two Copia-type (Bare and Maximus); and five Gypsy-type (Erika, Jeli, Sabrina, Sukkula1 and Sukkula3) LTRs. RT-qPCR analyses revealed that Erika1...

متن کامل

Wheat and barley dehydrins under cold, drought, and salinity – what can LEA-II proteins tell us about plant stress response?

Dehydrins as a group of late embryogenesis abundant II proteins represent important dehydration-inducible proteins whose accumulation is induced by developmental processes (embryo maturation) as well as by several abiotic stress factors (low temperatures, drought, salinity). In the review, an overview of studies aimed at investigation of dehydrin accumulation patterns at transcript and protein ...

متن کامل

Differentially expressed genes between drought-tolerant and drought-sensitive barley genotypes in response to drought stress during the reproductive stage

Drought tolerance is a key trait for increasing and stabilizing barley productivity in dry areas worldwide. Identification of the genes responsible for drought tolerance in barley (Hordeum vulgare L.) will facilitate understanding of the molecular mechanisms of drought tolerance, and also facilitate the genetic improvement of barley through marker-assisted selection or gene transformation. To m...

متن کامل

EFFECT OF SILICON PRIMING ON SEEDLING GROWTH, ROOT XYLEME ANATOMY AND ION ACCUMULATION OF BARLEY (Hordeum vulgare L.) TO ALLEVIATE DROUGHT STRESS

The detrimental drought effects could be listed as the loss in dry weight and silicon is known to enhance crop tolerance to drought by increasing seedling growth and hydraulic conductivity. To investigate the effects of silicon priming (0, 1 and 2 mM as sodium silicate), on seedling growth and root anatomy of three barley cultivars (Khatam, Rihane, and Nimrooz) a laboratory experiment was condu...

متن کامل

Variable Levels of Tolerance to Water Stress (Drought) and Associated Biochemical Markers in Tunisian Barley Landraces.

Due to its high tolerance to abiotic stress, barley (Hordeum vulgare) is cultivated in many arid areas of the world. In the present study, we evaluate the tolerance to water stress (drought) in nine accessions of "Ardhaoui" barley landraces from different regions of Tunisia. The genetic diversity of the accessions is evaluated with six SSR markers. Seedlings from the nine accessions are subject...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره 8  شماره 

صفحات  -

تاریخ انتشار 2016